Hello all,
i tried to make some test with ABySS using the mate pairs library as normal fragment libraries and as mate pair libraries. I test 101 bp libraries (both fragment and mate) with k-mer from 25-55. All the results using the mate pair libraries as normal ones had better results (a bigger N50).
How can i explain this?
Thank a lot in advance
i tried to make some test with ABySS using the mate pairs library as normal fragment libraries and as mate pair libraries. I test 101 bp libraries (both fragment and mate) with k-mer from 25-55. All the results using the mate pair libraries as normal ones had better results (a bigger N50).
How can i explain this?
Thank a lot in advance
