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Can short read aligner handle fastq with heterozygous nucleotide calls (ie, M, R, S, Y, K, etc)?? -
If you can convert them to fastas, or fastqs, you might be able to use a short-read aligner to ailgn them and make .bams. Or maybe one of tha blast output formats can be convertedLeave a comment:
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How to align diploid ab1 files to the reference genome?
I have some human ab1 chromatogram files. Is it possible to align them to the reference genome and get the bam file? How to do that? Thanks in advance!
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Tumors contain complex mixtures of cell populations that evolve in response to treatment and host-specific factors. Tissue biopsies provide only static snapshots of a tumor’s state. But what if we could follow that evolution over time using a minimally invasive technique?
Liquid biopsies can detect tumor-derived material circulating in the bloodstream, providing a way to study treatment response, detect emerging resistance, and discover new biomarkers. Circulating...10-14-2026, 09:55 AM
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