GATK for Complete Genomics Exome sequecning data - SEQanswers

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wzhang1001

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Join Date: Feb 2012

Posts: 8
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GATK for Complete Genomics Exome sequecning data

07-06-2012, 08:48 AM

Hello.

I have BAM files from Complete Genomics whole exome sequencing platform. Does anyone know what is the best tool(s)/workflow for variant calling using complete genomics BAM files?

Thanks in advance!
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