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  • simobioinfo
    replied
    Hi,
    I have problems in installing breakdancer.
    I downloaded the zip file from sourceforce and decompressed it.
    I found two suddirectories, perl and cpp.
    I try to make in cpp directory but I'm not able to compile breakdancer.
    Could anyone help me for this issue?
    Thanks

    Leave a comment:


  • jfshao1984
    replied
    After decompressing, there is only one file named "BreakDancer.release-0.0.1r56",and how to use ?
    I find that the file is a combination of several perl scripts,but i don't know how to use it.

    Leave a comment:


  • totalnew
    replied
    Originally posted by bioinfosm View Post
    Could you post your feedback and comments on using the tool?
    I am still running the program, the tool is very easy to use, but I may have questions during the running, I will track this thread to post all problems I meet.

    Leave a comment:


  • bioinfosm
    replied
    Could you post your feedback and comments on using the tool?

    Leave a comment:


  • pickw
    replied
    You can find it here

    Leave a comment:


  • totalnew
    started a topic BreakDancer problems

    BreakDancer problems

    Does anyone ever use BreakDancer to detect GSV?

    I downloaded it from http://genome.wustl.edu/tools/cancer-genomics, but I found I can't run it successfully, I don't know if I use correct command, does
    anyone successfully apply BreakDancer on PE libs? Would you please provide me some examples?

    thanks

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