Announcement

Collapse
No announcement yet.
X
 
  • Filter
  • Time
  • Show
Clear All
new posts

  • BreakDancer problems

    Does anyone ever use BreakDancer to detect GSV?

    I downloaded it from http://genome.wustl.edu/tools/cancer-genomics, but I found I can't run it successfully, I don't know if I use correct command, does
    anyone successfully apply BreakDancer on PE libs? Would you please provide me some examples?

    thanks

  • #2
    You can find it here

    Comment


    • #3
      Could you post your feedback and comments on using the tool?
      --
      bioinfosm

      Comment


      • #4
        Originally posted by bioinfosm View Post
        Could you post your feedback and comments on using the tool?
        I am still running the program, the tool is very easy to use, but I may have questions during the running, I will track this thread to post all problems I meet.

        Comment


        • #5
          After decompressing, there is only one file named "BreakDancer.release-0.0.1r56",and how to use ?
          I find that the file is a combination of several perl scripts,but i don't know how to use it.

          Comment


          • #6
            Hi,
            I have problems in installing breakdancer.
            I downloaded the zip file from sourceforce and decompressed it.
            I found two suddirectories, perl and cpp.
            I try to make in cpp directory but I'm not able to compile breakdancer.
            Could anyone help me for this issue?
            Thanks

            Comment

            Latest Articles

            Collapse

            • seqadmin
              Advanced Methods for the Detection of Infectious Disease
              by seqadmin




              The recent pandemic caused worldwide health, economic, and social disruptions with its reverberations still felt today. A key takeaway from this event is the need for accurate and accessible tools for detecting and tracking infectious diseases. Timely identification is essential for early intervention, managing outbreaks, and preventing their spread. This article reviews several valuable tools employed in the detection and surveillance of infectious diseases.
              ...
              11-27-2023, 01:15 PM
            • seqadmin
              Strategies for Investigating the Microbiome
              by seqadmin




              Microbiome research has led to the discovery of important connections to human and environmental health. Sequencing has become a core investigational tool in microbiome research, a subject that we covered during a recent webinar. Our expert speakers shared a number of advancements including improved experimental workflows, research involving transmission dynamics, and invaluable analysis resources. This article recaps their informative presentations, offering insights...
              11-09-2023, 07:02 AM

            ad_right_rmr

            Collapse

            News

            Collapse

            Topics Statistics Last Post
            Started by seqadmin, 12-01-2023, 09:55 AM
            0 responses
            19 views
            0 likes
            Last Post seqadmin  
            Started by seqadmin, 11-30-2023, 10:48 AM
            0 responses
            20 views
            0 likes
            Last Post seqadmin  
            Started by seqadmin, 11-29-2023, 08:26 AM
            0 responses
            14 views
            0 likes
            Last Post seqadmin  
            Started by seqadmin, 11-29-2023, 08:12 AM
            0 responses
            17 views
            0 likes
            Last Post seqadmin  
            Working...
            X