I tried to use SOAPsnp to call SNPs for RNA-seq data. When I used "make all" to install the SOAPsnp, it come out such words:
g++ -fomit-frame-pointer -O3 -ffast-math -funroll-loops -mmmx -msse -msse2 -msse3 -fmessage-length=0 -c -o call_genotype.o call_genotype.cc
In file included from call_genotype.cc:1:
soap_snp.h:12:51: error: boost/iostreams/filtering_streambuf.hpp: No such file or directory
soap_snp.h:13:36: error: boost/iostreams/copy.hpp: No such file or directory
soap_snp.h:14:43: error: boost/iostreams/filter/gzip.hpp: No such file or directory
make: *** [call_genotype.o] Error 1
I think it maybe have something wrong with the "boost", however I can not find an effective way to fix it,.Can anybody help me to install SOAPsnp? Thank you
g++ -fomit-frame-pointer -O3 -ffast-math -funroll-loops -mmmx -msse -msse2 -msse3 -fmessage-length=0 -c -o call_genotype.o call_genotype.cc
In file included from call_genotype.cc:1:
soap_snp.h:12:51: error: boost/iostreams/filtering_streambuf.hpp: No such file or directory
soap_snp.h:13:36: error: boost/iostreams/copy.hpp: No such file or directory
soap_snp.h:14:43: error: boost/iostreams/filter/gzip.hpp: No such file or directory
make: *** [call_genotype.o] Error 1
I think it maybe have something wrong with the "boost", however I can not find an effective way to fix it,.Can anybody help me to install SOAPsnp? Thank you
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