Unconfigured Ad

Collapse
X
 
  • Time
  • Show
Clear All
new posts
  • wisense
    Member
    • Sep 2011
    • 30

    #1

    How to install BEDTools on Linux server

    Hi,all
    I have got a problem when I want to install BEDTools on a linux server:
    I have no root account,so when I do"cp bin/* /usr/local/bin",it tells me "Permission denied".
    It's there some solutions to this problem?
    I hope you could give me some suggestion.
    Thanks a lot.

    Wisense
  • zaratieg
    Member
    • Jun 2010
    • 19

    #2
    i think you can put them anywhere you want, not just on /usr/local/bin. you could make your own /bin folder.

    mkdir ~/bin

    will make the directory in your home folder, then you can do cp bin/* ~/bin to copy the binaries etc over. Then you can add ~/bin to your PATH environment variable, or if you can't do that for whatever reason you can probably invoke the binaries explicitly, ie ~/bin/bamToBed

    Comment

    • wisense
      Member
      • Sep 2011
      • 30

      #3
      Originally posted by zaratieg View Post
      i think you can put them anywhere you want, not just on /usr/local/bin. you could make your own /bin folder.

      mkdir ~/bin

      will make the directory in your home folder, then you can do cp bin/* ~/bin to copy the binaries etc over. Then you can add ~/bin to your PATH environment variable, or if you can't do that for whatever reason you can probably invoke the binaries explicitly, ie ~/bin/bamToBed
      It works.
      Thanks very much.

      Comment

      Latest Articles

      Collapse

      • SEQadmin2
        Beyond CRISPR/Cas9: Understand, Choose, and Use the Right Genome Editing Tool
        by SEQadmin2



        CRISPR/Cas9 sparked the gene editing revolution for both research and therapeutics.1 But this system still showed severe issues that limited its applications. The most prominent were the heavy reliance on PAM sequences, delivery limitations, double-stranded breaks that prompt unintended edits and cell death, and editing inefficiency (both in targeting and in knock-in reliability).

        Despite this, “CRISPR helped turn genome editing from a specialized technique into
        ...
        07-31-2026, 11:01 AM
      • SEQadmin2
        Proteomic Platforms: How to Choose the Right Analytical Strategy to Improve Detection and Clinical Applications
        by SEQadmin2


        Proteomics platforms are evolving rapidly, with advances in mass spectrometry and affinity-based approaches expanding what researchers can detect and at what scale. As the field moves toward deeper proteome coverage and clinical applications, scientists face an increasingly complex landscape of tools. This article will explore how researchers are navigating these choices to find the right platform for their work.

        The systematic characterization of the human proteome has
        ...
        07-20-2026, 11:48 AM

      ad_right_rmr

      Collapse

      News

      Collapse

      Topics Statistics Last Post
      Started by SEQadmin2, 08-06-2026, 07:41 AM
      0 responses
      14 views
      0 reactions
      Last Post SEQadmin2  
      Started by SEQadmin2, 08-03-2026, 10:13 AM
      0 responses
      31 views
      0 reactions
      Last Post SEQadmin2  
      Started by SEQadmin2, 07-31-2026, 02:55 AM
      0 responses
      40 views
      0 reactions
      Last Post SEQadmin2  
      Started by SEQadmin2, 07-24-2026, 12:17 PM
      0 responses
      26 views
      0 reactions
      Last Post SEQadmin2  
      Working...