Obtain the positions of paired-end reads from a simulator

[vhtseq]

Hi all,

I'm going to simulate paired-end reads in one region (A) from a reference genome.
Are there any simulator which can let us know where the reads come from (the reads' positions cut from the region A)?

Thank you,
vht

[TiborNagy]

I have used stamply's read simulator. It contains the original position of the read.

[vhtseq]

Thanks TiborNagy,
I will try it.

I have used stamply's read simulator. It contains the original position of the read.