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  • Saro
    Junior Member
    • Sep 2012
    • 1

    #1

    cummeRbund-heatmap-dendrogram?

    Hello there,
    1. I am using cummeRbund to produce heatmap from my cuffdiff output (fpkm). Although I am using "labrow=F" still it is displaying the row names (gene names). I do not want this because I am producing the heatmap for large no. of genes. Is this a bug?
    2. I need to produce dendrograms (both column and row) as part of the heapmap. Can we do this in cummeRbund? If so could someone give me the code?
    Thanks
  • steindorff
    Junior Member
    • Jul 2011
    • 6

    #2
    Try 'labRow=F'. This capital 'R' make difference.

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