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  • annotation for viral genome

    I am working on chipseq data for virus and wonder is there a tool to annotate the genome. I have FAStq file as well as NCBI accession no which will have all annottaions. Doing mannual may add errors and time consuming so I am trying to find if there is smart tool available out. Once I have chip tag enriched I can map the genome reggions back to their annottaion.


    Thanks

  • #2
    Is the virus assembled into a contiguous sequence?

    Is it an accession number for the sequence, or the short reads?

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    • #3
      annotation for viral genome

      It has NCBI accession number.

      Comment


      • #4
        Originally posted by honey View Post
        It has NCBI accession number.
        What is the accession number?

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