can you tell how to solve the problem? Because I also got the same problem, it mean that when i used the command ''samtools tview 140222A2.sorted.bam ~/tan_analysis/IRGSP-1.0_genome.fasta''
the screening show ''NNNNNN'' all
Can you suggest please?
Thank you very much
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problem using samtools tview viewer
Hello,
Has anyone had a problem using the samtools tview?
using the command
samtools tview sorted.bam ref.fa
I simply get a blank black screen and no display, no error message either.
Is this because the reference sequence is too big?
I have not had any problems before with tview but here I am trying to view an alignment against all 5 chromosomes rather than 1 chromosome at a time.
Any advice would be appreciated, thanks.
osition" to which you wish to move.
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