SomaticSniper installation problem

[id0]

I just tried installing SomaticSniper on Mac OS X 10.7. Everything seemed to be going smoothly. The final instruction from the installation page is "The binary can then be found in the bin/ subdirectory of your build directory". There is a bin subdirectory created, but it is empty. Has anyone seen this before?

This is the output I see when running cmake (there does not seem to be anything wrong):
-- The C compiler identification is GNU 4.2.1
-- The CXX compiler identification is Clang 3.1.0
-- Checking whether C compiler has -isysroot
-- Checking whether C compiler has -isysroot - yes
-- Checking whether C compiler supports OSX deployment target flag
-- Checking whether C compiler supports OSX deployment target flag - yes
-- Check for working C compiler: /usr/bin/gcc
-- Check for working C compiler: /usr/bin/gcc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
No CMAKE_BUILD_TYPE specified, defaulting to release
SAMTOOLS_ROOT is set to: /usr/local/genome/samtools-0.1.6
-- Found ZLIB: /usr/lib/libz.dylib (found version "1.2.5")
-- Found Samtools
- Samtools include dirs: /usr/local/genome/samtools-0.1.6;/usr/include
- Samtools libraries: /usr/local/genome/samtools-0.1.6/libbam.a;/usr/lib/libz.dylib
-- Looking for include file pthread.h
-- Looking for include file pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - found
-- Found Threads: TRUE
-- Could NOT find GTest (missing: GTEST_LIBRARY GTEST_INCLUDE_DIR GTEST_MAIN_LIBRARY)
Google Test framework not found, no tests will be built
GTest is available at http://code.google.com/p/googletest/
Ubuntu users can likely sudo apt-get install gtest
-- Configuring done
-- Generating done
-- Build files have been written to: /Users/xxxxx/Desktop/sniper

Any help would be much appreciated.

Thank you.

[ernfrid]

Hi id0,

I don't see where you ran make in your output and I believe that is the last step of the installation. Did you run make after running cmake? If so, what version of cmake are you running?

[id0]

I knew I must have made some really basic mistake. Running make built the binary successfully. I don't know how I missed that part of the instructions. I guess I assumed that cmake was a fork of make with additional options.

Thanks for catching that!