Defining new gene Clusters
Hi,
I am interested in defining gene clusters(Gene having same functions/protein products) in a nematode genome. Is there any available software/methods defining these clusters? I have gone through some articles. They defined gene clusters, if 3 genes in a row having same function. Is there any possibility with sliding window approach? Lets say in a window of 5kb, if we get 3-4 genes (with same protein product) we can assign a cluster/island. Please suggest me other possible ways and any article related to this kind of cluster study.
Many thanks in advance,
Rahul
I am interested in defining gene clusters(Gene having same functions/protein products) in a nematode genome. Is there any available software/methods defining these clusters? I have gone through some articles. They defined gene clusters, if 3 genes in a row having same function. Is there any possibility with sliding window approach? Lets say in a window of 5kb, if we get 3-4 genes (with same protein product) we can assign a cluster/island. Please suggest me other possible ways and any article related to this kind of cluster study.
Many thanks in advance,
Rahul