Tag reads from cases and controls

meher

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Join Date: Jun 2011

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Tag reads from cases and controls

10-25-2012, 10:48 AM

Hi all,

I would like to pool the Illumina reads from cases and controls into a single read file and run the analysis(aligning...variant calling) to calculate the MAF for association mapping. I would like to differentiate the reads from cases nd controls while visualizing and differentiating b/n the two. Could anyone give some suggestion?

Thanks in advance.
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