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  • dgio
    Junior Member
    • Oct 2012
    • 3

    #1

    Subject organism name from Blastp result

    Hi everyone,
    I have a set of proteins ID that i'm blasting locally using blastp and the new blast+ program.

    The problem is that I cannot retrieve in any way the name of the organism to whoch the subject id refers.

    It would be wonderfull if I could find a way to get the full description appear for the subject sequence (instead of truncated one) or blast the obtained gi from the tabular output (-outfmt 7) and obtain the organism name.

    Any suggestions??

    Thanks all!!!

    D
  • maubp
    Peter (Biopython etc)
    • Jul 2009
    • 1544

    #2
    You are not alone:
    This is an open letter to the NCBI BLAST+ team to request two simple enhancements which I think would be extremely useful - first and foremo...


    Please email the NCBI and tell them this is important, and it might help encourage them to actually implement it.

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