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  • xiongdianguang
    Junior Member
    • Apr 2012
    • 9

    #1

    GTF convert to GFF

    Hello everyone,I meet a problem in converting GTF format to a GFF format like the example in the http://122.228.158.106/SplicingViewe...fGene_hg18.gff. The GTF format is the normal one. I try some method but it doesn't work. Can some one help me?
  • Triple_W
    Member
    • Jan 2012
    • 12

    #2
    If you are familar with perl. I think the script ucsc_table2gff3.pl from biotoolbox can solve your problem.
    see http://code.google.com/p/biotoolbox/

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    • xiongdianguang
      Junior Member
      • Apr 2012
      • 9

      #3
      Excuse me,I want to ask you a question about, did the link I give is a normal gff formation?

      Comment

      • Triple_W
        Member
        • Jan 2012
        • 12

        #4
        Originally posted by xiongdianguang View Post
        Excuse me,I want to ask you a question about, did the link I give is a normal gff formation?
        I cannot download your "gff" file, can you paste some head lines?

        Comment

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