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  • Galaxy user
    Junior Member
    • Feb 2013
    • 1
    #1

    Galaxy-ChIP-seq analysis: UCSC Genome browser can't read the wig file.

    Hello guys,

    I am using the Galaxy web tool to analyze ChIP-seq data. By applying MACS algorithm, the Galaxy browser generated bed and wig files. Within the Galaxy browser, the bed file has a link to the UCSC Genome browser, whereas the wig file has no link to the UCSC browser. I wonder which file is best to visualize the peaks in the UCSC Genome browser and how? Any experience or just thoughts?

    Thank you in advance!
    Tags: None
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