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omiguele

Junior Member

Join Date: Sep 2012

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Peak confidence in FindPeaks

02-28-2013, 12:31 PM

Hello I am using Find Peaks without control data, is there any option so I can get statistical confidence on my peaks?. I see that the Min. cov. allowed is 0.001 but how do I know which is the best minimum coverage and minimum peak size ?

Thank you for your help
Tags: chip-seq, findpeaks, peak calling

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