TGICL: Error at step 'Clustering'

[huiyee1]

Dear all,

I experienced error in running it. The process terminated with at error at step 'Clustering' . The error message is as follows:

Error getting file size for "zdir_cluster_1 -s 700 cluster_1/*.Z
Error at command:
zmsort -f10 -n -r -o zdir_cluster_1 -s 700 cluster_1/*.Z

Process terminated with an error, at step 'Clustering'!
tgicl (filedb.fa) encountered an error at step Clustering


How can I solve the problem? I urgently need your advice.

Thanks in advance.

[biomichael]

have you solved the problem, I also encounted the same problem.

[sklages]

Dear all,

I experienced error in running it. The process terminated with at error at step 'Clustering' . The error message is as follows:

Error getting file size for "zdir_cluster_1 -s 700 cluster_1/*.Z
Error at command:
zmsort -f10 -n -r -o zdir_cluster_1 -s 700 cluster_1/*.Z

Process terminated with an error, at step 'Clustering'!
tgicl (filedb.fa) encountered an error at step Clustering


How can I solve the problem? I urgently need your advice.

Thanks in advance.

What kind/size of dataset?

TGICL uses 32bit programs, you will run into problems with huge datasets. We also had problems with zmsort,. it had a bug AFAIR.

As this package is not maintained/developed anymore, there will be no more bug fixes nor support. Think about switching to other software packages.