Depending on what exactly you meant with those brackets, the EMBOSS tool backtranseq or backtranambig might do what you need:
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Thanks! I will keep looking for more tools. I did spend some time using Google, I guess my search query wording wasn't the right one.Originally posted by dietmar13 View Postit took me 5 sec to find this (for sure shorter than writing your question):
http://arraygenetics.com/home.php?co...%20Calculator)
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Google
it took me 5 sec to find this (for sure shorter than writing your question):
http://arraygenetics.com/home.php?co...%20Calculator)
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Reverse Translation of consensus pattern
Hi everyone,
I am moving my question to this forum because it seems more appropriate.
I am looking for a bioinformatic tool that will back translate a consensus pattern from an amino acid to a oligonucleotide. The sequence will be in this kind of format: (the x will be part of the input)
"C-x(6)-C-x(6)"
The tool should allow for degeneracy. I have been told it does exist, any suggestions?
Thank you!Tags: None
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