GALAXY on Bio-Linux

[zgtmann]

Hello all bioinformatics,

please could you help me, I am not experienced "linux guy" :-)
But I trying to run galaxy directly from my computer? I am using Bio-Linux (ubuntu distribution) and there is GALAXY already install. When I try to open it, it is state that:

"The Galaxy server doesn't seem to be running on your machine. You may need to start it with the command: sudo start galaxy Or else Galaxy may still be starting up (it takes a couple of minutes to get going on the first run)"

When I open terminal and write sudo start galaxy it is state that galaxy start/running... But when I trying to open galaxy (just double clic on the icon) it still state problem which I write above.

Could you help me please how to fix it??

Thank you very much for your reply!

Have a nice day,

Petr.

[GenoMax]

If galaxy is indeed running on your instance of biolinux then have you tried to open a browser window and typing in http://localhost:8080 to see if galaxy interface comes up?

[zgtmann]

Thank you for reply..But it still doesnt work :-( I have my second pc (notebook) and there is a biolinux also and it is work prefectly fine :-( I dont know, where is problem..

[A.N.Other]

Do you have any proxy settings configured that might be interfering with the program accessing the running server?

Add the following to /etc/environment and see if that solves it.

no_proxy=localhost,127.0.0.0/8,*.local
NO_PROXY=localhost,127.0.0.0/8,*.local

You'll need to have root permissions / sudoers access to edit the file, by the way.