SRA-Toolkit 2.3.1 fastq-dump multiplefiles at once Windows command line
Hi Guyz,
I am not software professional so bare with me if I am asking some silly questions.
I have downloaded SRP003329 study, which contains 20 sub-directory with .sra files. Now I am able to convert all these files individually into fastq format using fastq-dump command.
.../bin/fastq-dump -A [ ] -O []
but I want to know how I can do the same for all the .sra files in my dir SRP003329 at once. something like find all .sra files in my directory and fastq-dump all at once.
Thanks
Deep
I am not software professional so bare with me if I am asking some silly questions.
I have downloaded SRP003329 study, which contains 20 sub-directory with .sra files. Now I am able to convert all these files individually into fastq format using fastq-dump command.
.../bin/fastq-dump -A [ ] -O []
but I want to know how I can do the same for all the .sra files in my dir SRP003329 at once. something like find all .sra files in my directory and fastq-dump all at once.
Thanks
Deep