miRNa sequencing and comparision

bfantinatti

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Join Date: Aug 2012

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#1

miRNa sequencing and comparision

05-02-2013, 05:42 PM

Hello guys,
I have a project in which I intend to analyse miRNAs from various tissues between two different groups. Ex: To compare liver miRNAs from group 1 against liver miRNAs from groups 2 (both groups are the same species and the same sex. The difference is as specific condition - which is the key of this analysis).
The data was obtained through Illumina sequencing.
I have found a software that can give me this comparision I need (MirnaKey), this software apparently does not work (at least here in my machine - Linux mint 14).
I would like to know if any one there knows annother miRNA software capable to do this kind of analysis.
Any one there already did this miRNA comparision?

Best regards
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rlegendre

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Join Date: Sep 2010

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#2

05-02-2013, 11:56 PM

Hi !

You have miRNATools https://sites.google.com/site/mirnatools/ for all miRNA analysis

Bye,
Rachel
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bfantinatti

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#3

05-03-2013, 03:44 AM

Thank you

Thank you a lot Rachel, I wiil take a look
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