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ContigScape for visual interactive gap closure
Dear all,
We developed a Cytoscape plugin called ContigScape for you to resolve possible relationship between contigs from 454 or mate-paired sequencing. The program is easy to use and highly interactive. If you are looking for programs for a guidance in gap closure using Sanger sequencing, please try ContigScape. Here is the screenshot.
And here is the publication: Tang B, et al. ContigScape: a Cytoscape plugin facilitating microbial genome gap closing. BMC Genomics. 2013 Apr 30;14(1):289. PMID: 23627759. You can find the program from Cytoscape plugin manager or our app homepage: http://apps.cytoscape.org/apps/contigscape. We'd be glad to hear any suggestions from you.
Regards,
Qi Wang
We developed a Cytoscape plugin called ContigScape for you to resolve possible relationship between contigs from 454 or mate-paired sequencing. The program is easy to use and highly interactive. If you are looking for programs for a guidance in gap closure using Sanger sequencing, please try ContigScape. Here is the screenshot.
And here is the publication: Tang B, et al. ContigScape: a Cytoscape plugin facilitating microbial genome gap closing. BMC Genomics. 2013 Apr 30;14(1):289. PMID: 23627759. You can find the program from Cytoscape plugin manager or our app homepage: http://apps.cytoscape.org/apps/contigscape. We'd be glad to hear any suggestions from you.
Regards,
Qi Wang
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