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  • ewilbanks
    Member
    • Mar 2009
    • 83
    #1

    sam/bam to ace?

    Does anyone know of a way to convert a sam or bam file to .ace ? Seems a bit odd but I have a specific program (Strainer for viewing strain variants in metagenomic data) that expects either an ace file or blastn output. My long read alignments look much nicer using bwa mem than blastn and so I'd rather use this, but tools like Tablet don't have the strain variant features I need.

    Thanks!
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