De Novo Assembly

[G_mich]

Hello,

I want to do a De Novo assembly of a select region of interest for a library of paired end reads sequenced using Illumina HiSeq. I will appreciate any suggestion for a downloadable tool.

Thanks!

[GenoMax]

Start here: http://en.wikibooks.org/wiki/Next_Ge..._novo_assembly

[G_mich]

Thank you!