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  • Gene Expression data without Cel file

    Hi

    I was wondering is there any application that could be used to generate a .gct file without having the .cel file.

    Currently, I am using http://www.genomespace.org/ , it basically combines a bunch of great tools together for the user to use.

    This workflow: http://www.genomespace.org/support/g...ess-to-gitools

    Unfortunately, the data set that I am working with does not have a .cel nor the raw data available.

    The zip file does contained a few text files with tabbed gene expression. I was wondering if it was a way to use that to generate gene expression data that I could possibly use or even combine with the cufflinks expression that I have without using cummRbund as I am not too proficient with R just yet. Or if there a very dummy guide to use CummRbund with R and how to use everything

    Thank you everyone.

    Thank you,

    Zain

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