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  • morning latte
    Member
    • Jun 2013
    • 91

    #1

    how to find prophage sequence

    I have viral metagenomes generated from illumina GA. They are de novo assembled. There are a couple of programs finding prophage sequences that I've never used. Please give me any recommendation if you have an idea or experience. Thank you.
  • Torst
    Senior Member
    • Apr 2008
    • 275

    #2
    PHAST(PHAge Search Tool) is a web server designed to rapidly and accurately identify, annotate and graphically display prophage sequences within bacterial genomes or plasmids.

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