Well, it depends: on ubuntu I get an (boost) error, pthread_mutex_lock(m). strace tells me that this is probably related to memory allocation. On our server systems (home made linux), isaac-align hangs at "Determining memory capacity for Fastq data" and is waiting forever :-) Again, some problem with memory allocation!?
And it is always an issue that you never get "understandable & and error related error messages" with illumina (unix) software :-)
And it is always an issue that you never get "understandable & and error related error messages" with illumina (unix) software :-)
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