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Help my GWAS analysis
Now I analyze several NGS data such as chip-seq, bisul-seq or RNA-seq. I can get several significant regions by comparing two samples(or same sample with different conditions). I make such kind of data sets as bed files.
In other hand, now we have many data on GWAS, which show the relation ships between SNV and diseases.
My question is
How can I get diseases or phenotypes significantly related to my selected region data from whole GWAS?
If there are any program or R packages or perl module, please let me know.
gatapishi
In other hand, now we have many data on GWAS, which show the relation ships between SNV and diseases.
My question is
How can I get diseases or phenotypes significantly related to my selected region data from whole GWAS?
If there are any program or R packages or perl module, please let me know.
gatapishi