Seqanswers Leaderboard Ad

Collapse

Announcement

Collapse
No announcement yet.
X
 
  • Filter
  • Time
  • Show
Clear All
new posts

  • leebo
    started a topic Bowtie2 library path

    Bowtie2 library path

    Hi,

    I am trying to run bowtie mapper on a cluster machine, but it seems like I'm having an old version of GLIB. When I submit my job to a cluster, I was getting :

    <bowtie path>/bowtie2-align: /usr/lib64/libstdc++.so.6: version `GLIBCXX_3.4.11' not found (required by <bowtie path>/bowtie2-align)

    The issue here is that my system administrator cannot upgrade this library file "libstdc++.so.6" (currently using libstdc++.so.6.0.10) to newer version (libstdc++.so.6.0.13) due to other dependancies.

    I tried copying over libstdc++.so.6.0.13 to my local directory and added it on LD_LIBRARY_PATH, but it seems like doesn't working so far. Is there anyone else who had same issues? Any help/suggestion will be greatly appreciated!

    Thanks,
    Bohyun

Latest Articles

Collapse

  • seqadmin
    Exploring the Dynamics of the Tumor Microenvironment
    by seqadmin




    The complexity of cancer is clearly demonstrated in the diverse ecosystem of the tumor microenvironment (TME). The TME is made up of numerous cell types and its development begins with the changes that happen during oncogenesis. “Genomic mutations, copy number changes, epigenetic alterations, and alternative gene expression occur to varying degrees within the affected tumor cells,” explained Andrea O’Hara, Ph.D., Strategic Technical Specialist at Azenta. “As...
    07-08-2024, 03:19 PM

ad_right_rmr

Collapse

News

Collapse

Topics Statistics Last Post
Started by seqadmin, Yesterday, 06:46 AM
0 responses
9 views
0 likes
Last Post seqadmin  
Started by seqadmin, 07-24-2024, 11:09 AM
0 responses
24 views
0 likes
Last Post seqadmin  
Started by seqadmin, 07-19-2024, 07:20 AM
0 responses
159 views
0 likes
Last Post seqadmin  
Started by seqadmin, 07-16-2024, 05:49 AM
0 responses
127 views
0 likes
Last Post seqadmin  
Working...
X