QUAST GFF files for genes

pari_89

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Join Date: Apr 2013

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#1

QUAST GFF files for genes

07-15-2013, 12:37 PM

Hi everyone, I am using QUAST to evaluate my assemblies. I have two annotated reference genomes and they are found in genbank. QUAST takes gff files for genes and operons and I would like to know whether these files are present for S.aureus MRSA252 and Bacillus subtilis strain 168.

Can you tell me where to find them?

Thank you very much.
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GenoMax

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Join Date: Feb 2008

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07-15-2013, 05:28 PM

Verify that these are the correct strains (right-click on links below and "save as").

B. subtilis 168: ftp://ftp.ncbi.nih.gov/genomes/Bacte.../NC_000964.gff

S. aureus MRSA252: ftp://ftp.ncbi.nih.gov/genomes/Bacte.../NC_002952.gff

Last edited by GenoMax; 07-15-2013, 05:30 PM.
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