I've been trying to sort a bed file with bedtools and bedops.
Both seem to sort the bed file lexicographically.
That means if my input test file is:
input:
output:
and desired output is:
any ideas how to achieve that?
Both seem to sort the bed file lexicographically.
That means if my input test file is:
input:
Code:
chr1 10 30 chr2 30 10 chr3 10 30 chr13 30 40 chr5 10 20
Code:
chr1 10 30 chr 13 30 40 chr2 30 10 chr3 10 30 chr5 10 20
Code:
chr1 10 30 chr2 30 10 chr3 10 30 chr5 10 20 chr13 30 40
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