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I recently installed the VB version of CloVR and attempted to run the metagenomic pipeline using the dashboard interface.
Everything runs smoothly until this error.
Everything runs smoothly until this error.
Upload nucleotide metagenomics DB
2 min 4 sec hide info
workflow id: 937
state: failed
start time: Thu Sep 26 18:53:25 2013
end time: Thu Sep 26 18:55:29 2013
duration: 2 min 4 sec
return value: 1
stdout: not defined
stderr: not defined
command:
vp-transfer-dataset --tag-name clovr-refseqdb --dst-cluster local --block --expand
return value: 1
message: Error executing script exit value: 1Traceback (most recent call last): File "/opt/vappio-py/vappio/cli/vp-transfer-dataset", line 61, in main(*cli.buildConfigN(OPTIONS)) File "/opt/vappio-py/vappio/cli/vp-transfer-dataset", line 57, in main runTaskStatus(taskName) File "/opt/vappio-py/vappio/tasks/utils.py", line 119, in runTaskStatus commands.runSystemEx(' '.join(cmd)) File "/opt/vappio-py/igs/utils/commands.py", line 134, in runSystemEx raise ProgramRunError(cmd, code) igs.utils.commands.ProgramRunError: Unable to run program u'vp-describe-task --show --show-error --exit-code --block --no-print-polling --host=localhost transferTag-1380221605.92' with exit code 1
2 min 4 sec hide info
workflow id: 937
state: failed
start time: Thu Sep 26 18:53:25 2013
end time: Thu Sep 26 18:55:29 2013
duration: 2 min 4 sec
return value: 1
stdout: not defined
stderr: not defined
command:
vp-transfer-dataset --tag-name clovr-refseqdb --dst-cluster local --block --expand
return value: 1
message: Error executing script exit value: 1Traceback (most recent call last): File "/opt/vappio-py/vappio/cli/vp-transfer-dataset", line 61, in main(*cli.buildConfigN(OPTIONS)) File "/opt/vappio-py/vappio/cli/vp-transfer-dataset", line 57, in main runTaskStatus(taskName) File "/opt/vappio-py/vappio/tasks/utils.py", line 119, in runTaskStatus commands.runSystemEx(' '.join(cmd)) File "/opt/vappio-py/igs/utils/commands.py", line 134, in runSystemEx raise ProgramRunError(cmd, code) igs.utils.commands.ProgramRunError: Unable to run program u'vp-describe-task --show --show-error --exit-code --block --no-print-polling --host=localhost transferTag-1380221605.92' with exit code 1
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