Seqanswers Leaderboard Ad

Collapse

Announcement

Collapse
No announcement yet.
X
 
  • Filter
  • Time
  • Show
Clear All
new posts

  • Problem in installing mira 4

    Hi all,
    I'm new to this community.
    I was trying to install mira 4 on my fedora 15 machine, and had encountered a lot of problems.
    I already googled them but I didn't find the solution.

    $ ./configure

    --------------------------------------------------------------------------
    Summary of MIRA configuration
    --------------------------------------------------------------------------

    Building version ................................. 4.0rc2_linux-gnu_x86_64_dynamic
    We are building on ............................... Linux
    CPU supports 64 bit? ............................. yes
    Compiler ......................................... gcc
    Compiler optimisation flags used ................. -O3 -funroll-loops
    Do we compile in 64 bit? ......................... yes
    Building completely static? ...................... no
    BOOST expected to compile and link? .............. yes
    Linking with TCmalloc library? ................... yes

    $ make

    make[5]: *** [sam_collect.o] Error 1
    make[5]: Leaving directory `/NAS3/mira-4.0rc2/src/mira'
    make[4]: *** [all] Error 2
    make[4]: Leaving directory `/NAS3/mira-4.0rc2/src/mira'
    make[3]: *** [all-recursive] Error 1
    make[3]: Leaving directory `/NAS3/mira-4.0rc2/src'
    make[2]: *** [all] Error 2
    make[2]: Leaving directory `/NAS3/mira-4.0rc2/src'
    make[1]: *** [all-recursive] Error 1
    make[1]: Leaving directory `/NAS3/mira-4.0rc2'
    make: *** [all] Error 2

    Any suggestion what I should do?

    Thanks,
    Sam

  • #2
    Ask on the mira_talk mailing list, where you should get a prompt answer. Release Candidates are a way for developers to get community feedback - so use the MIRA mailing list to provide that feedback.

    Also you are using RC2, when RC3 is already out.

    Finally, you could try using the provided binaries rather than compiling MIRA yourself.

    Comment


    • #3
      Link to Sam's MIRA mailing list thread:

      Comment


      • #4
        Hi maubp,
        It help me a lot and I can run MIRA in my Fedora machine.

        Thank you!

        Comment

        Latest Articles

        Collapse

        • seqadmin
          Current Approaches to Protein Sequencing
          by seqadmin


          Proteins are often described as the workhorses of the cell, and identifying their sequences is key to understanding their role in biological processes and disease. Currently, the most common technique used to determine protein sequences is mass spectrometry. While still a valuable tool, mass spectrometry faces several limitations and requires a highly experienced scientist familiar with the equipment to operate it. Additionally, other proteomic methods, like affinity assays, are constrained...
          04-04-2024, 04:25 PM
        • seqadmin
          Strategies for Sequencing Challenging Samples
          by seqadmin


          Despite advancements in sequencing platforms and related sample preparation technologies, certain sample types continue to present significant challenges that can compromise sequencing results. Pedro Echave, Senior Manager of the Global Business Segment at Revvity, explained that the success of a sequencing experiment ultimately depends on the amount and integrity of the nucleic acid template (RNA or DNA) obtained from a sample. “The better the quality of the nucleic acid isolated...
          03-22-2024, 06:39 AM

        ad_right_rmr

        Collapse

        News

        Collapse

        Topics Statistics Last Post
        Started by seqadmin, 04-11-2024, 12:08 PM
        0 responses
        30 views
        0 likes
        Last Post seqadmin  
        Started by seqadmin, 04-10-2024, 10:19 PM
        0 responses
        32 views
        0 likes
        Last Post seqadmin  
        Started by seqadmin, 04-10-2024, 09:21 AM
        0 responses
        28 views
        0 likes
        Last Post seqadmin  
        Started by seqadmin, 04-04-2024, 09:00 AM
        0 responses
        53 views
        0 likes
        Last Post seqadmin  
        Working...
        X