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  • MurielGB
    Member
    • Oct 2013
    • 51
    #1

    bwa: mapping reads of different size ?

    Hello !
    I plan to trim my Illumina data with Sickle based on quality and length and I will therefore have different read length in the output.
    I want to make sure that bwa is ok to use an input read file with reads of different length ?
    Thanks a lot !
    Muriel
    Tags: None
    • dpryan
      Devon Ryan
      • Jul 2011
      • 3478
      #2
      It's fine with that.

        Comment

        • MurielGB
          Member
          • Oct 2013
          • 51
          #3
          Thanks a lot !

            Comment

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