theoretically, you can. You need to derive GO annotation for the genes of this species using tools like blast2go. Then generate GO gene set data like the ones used in gage tutorial. You need to use R function split() to get the gene set list.
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Any chance someone already encountered this kind of summarizeOverlaps error?
http://seqanswers.com/forums/showthr...806#post184806Comment
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Please don't post the same issue in multiple threads. It's good that you created a new thread for this problem, but you need to give people some credit for being able to find existing threads without further advertising.Comment
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