Hello, does someone know how to comare two SNP calling files in gff format?
Thanks for your help!
Thanks for your help!
-
-
That's exactly what I am looking, very useful.
ThanksComment
-
installed BEDtools (BEDTools.v2.4.2.tar.gz), but only has bamToBed under bin/
other tools?Comment
-
That's quite odd.
Did you type "make" then Enter in the BEDTools directory? This should have compiled all 17 tools and placed the resulting binaries in bin/Comment
-
Hi Quinlana,
Got all 17 tools with the help from our admin. BTW, when I only type bedtools, all the 17 tools should be list, otherwise I have to go to the path to find out which function bedtools has.
ThanksComment
-
NGS has revolutionized clinical microbiology by offering new ways to identify and surveil pathogens without prior knowledge of the target. One popular approach is 16S rRNA and ITS amplicon sequencing, which targets specific microbial markers. But studies are increasingly incorporating shotgun metagenomics, a technique that sequences all DNA from a sample without targeting specific microbial markers. This approach allows more detailed taxonomic classification, detection...Today, 06:46 AM -
Tumors contain complex mixtures of cell populations that evolve in response to treatment and host-specific factors. Tissue biopsies provide only static snapshots of a tumor’s state. But what if we could follow that evolution over time using a minimally invasive technique?
Liquid biopsies can detect tumor-derived material circulating in the bloodstream, providing a way to study treatment response, detect emerging resistance, and discover new biomarkers. Circulating...10-14-2026, 09:55 AM
Comment