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  • coverage calculation - Bedgraph files

    Hi All,
    I have several bed graph files . If suppose in file 1 coverage is represented as and file 2 as second line
    chr1 12340 12350 12
    chr1 12342 12353 23

    I want my output to be

    chr1 1230 12341 12
    chr1 12342 12350 35
    chr1 12350 123 23

    Does any one know if there are any tools to do that or what is good way to solve this problem ?

    Thanks in advance,
    Anusha.Ch

  • #2
    Not sure if bedtools can do this or not

    Comment

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