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  • agroster
    Member
    • Jan 2010
    • 13

    #1

    edena singletons

    Does anyone know if it is possible to get the singletons (unused/unassembled sequences) from an EDENA assembly? Only three files are generated from the assembly, and none of these shows unused sequences.

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    Reply to 16S/ITS Profiling vs. Shotgun Metagenomics: What Changes in Your Workflow?
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    16S/ITS Profiling vs. Shotgun Metagenomics: What Changes in Your Workflow?
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    NGS has revolutionized clinical microbiology by offering new ways to identify and surveil pathogens without prior knowledge of the target. One popular approach is 16S rRNA and ITS amplicon sequencing, which targets specific microbial markers. But studies are increasingly incorporating shotgun metagenomics, a technique that sequences all DNA from a sample without targeting specific microbial markers. This approach allows more detailed taxonomic classification,...
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