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  • clustering short reads

    Hello, and sorry if in some other thread is the answer. But I would like to cluster short reads from solexa technology. These reads are from 15 nt to 26 nt long. Do you now some program that does it???

    thanks very much

  • #2
    Uclust by Bob Edgar

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    • #3
      vmatch is pretty good at this
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      Jeremy Leipzig
      Bioinformatics Programmer
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