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Update: If there are limitations on the number of participants due to rising Covid 19 cases, priority will be given to those who have registered (and paid) first. -
Dear LarsB, there are some last seats available. If you would like to join, you should apply soon. We would be happy to meet you in Leipzig!Leave a comment:
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In-person RNA-Seq Data Analysis Workshop in Leipzig, Germany (October 25-28, 2022)
RNA-Seq Data Analysis Workshop
Quality Control, Read Mapping, Visualization and Downstream Analyses
When? October 25-28, 2022
Where? Leipzig, Germany
Link? https://www.ecseq.com/workshops/work...-data-analysis
Advance your research. Understand RNA-Seq analyses challenges and solve them yourself.
In a nutshell- Learn the essential computing skills for NGS bioinformatics
- Understand NGS analysis algorithms (e.g. read alignment) and data formats
- Use bioinformatics tools for handling RNA-Seq data
- Create diagnostic graphics and statistics
- Compare different approaches for differential expression analysis
More information and application: https://www.ecseq.com/workshops/work...-data-analysis
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Differential Expression and Data Visualization: Recommended Tools for Next-Level Sequencing Analysis
After covering QC and alignment tools in the first segment and variant analysis and genome assembly in the second segment, we’re wrapping up with a discussion about tools for differential gene expression analysis and data visualization. In this article, we include recommendations from the following experts: Dr. Mark Ziemann, Senior Lecturer in Biotechnology and Bioinformatics, Deakin University; Dr. Medhat Mahmoud Postdoctoral Research Fellow at Baylor College of Medicine;...05-23-2023, 12:26 PM -
Continuing from our previous article, we share variant analysis and genome assembly tools recommended by our experts Dr. Medhat Mahmoud, Postdoctoral Research Fellow at Baylor College of Medicine, and Dr. Ming "Tommy" Tang, Director of Computational Biology at Immunitas and author of From Cell Line to Command Line.
Variant detection and analysis tools
Mahmoud classifies variant detection work into two main groups: short variants (<50...05-19-2023, 10:03 AM -
With new tools and computational resources being released regularly, it can be hard to determine which are best suited for the analysis process and which older tools continue to be maintained. In an effort to assist the sequencing community, we interviewed three highly skilled bioinformaticians about their recommended tools for several important analysis applications.
Quality control and preprocessing tools
“Garbage in, garbage out” is a popular...05-16-2023, 10:11 AM
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