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  • public 100X WGS dataset

    Hello everyone,

    I would need to run some benchmarks of Parabricks (for Germline and Somatic pipelines) in order to evaluate our system (an hpc cluster) performance on a public 100X WGS dataset. Do you know any public dataset I can download for this purpose?

    Thank you!

  • #2
    Have you found one? I am also looking for WGS datasets.
    Max [email protected]

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