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  • cjo4m4fm
    Junior Member
    • Aug 2013
    • 4

    Conifer:error of ploting

    Hello everyone:

    I perfomred the quick start on dos
    (http://conifer.sourceforge.net/quickstart.html)

    I tried:
    C:\Python27\python conifer.py plotcalls --input analysis.hdf5 --calls calls.txt --outputdir ./call_images/

    bur I got error messages:

    Traceback (most recent call last):
    File "conifer.py", line 682, in <module>
    args.func(args)
    File "conifer.py", line 534, in CF_plotcalls
    plt.savefig(args.outputdir + "/" + outfile)
    File "C:\Python27\lib\site-packages\matplotlib\pyplot.py", line 472, in savefi
    g
    return fig.savefig(*args, **kwargs)
    File "C:\Python27\lib\site-packages\matplotlib\figure.py", line 1370, in savef
    ig
    self.canvas.print_figure(*args, **kwargs)
    File "C:\Python27\lib\site-packages\matplotlib\backend_bases.py", line 2096, i
    n print_figure
    **kwargs)
    File "C:\Python27\lib\site-packages\matplotlib\backends\backend_agg.py", line
    497, in print_png
    filename_or_obj = open(filename_or_obj, 'wb')
    IOError: [Errno 2] No such file or directory: './call_images//chr1_155178595_155
    217746_RPKM_data\\NA19129.png'
    Closing remaining open files: analysis.hdf5... done


    The error occured might because of the term"./call_images/".
    It that for the difference b/w dos and linux?
    How can I do for it?

    Any help will be very appreciated,thank you!!
    Last edited by cjo4m4fm; 12-01-2013, 02:59 AM.

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