Interpreting Color by Pair Orientation

loyaltman

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Join Date: Jan 2016

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Interpreting Color by Pair Orientation

04-18-2024, 12:45 AM

I have got several bam files using the same pipeline. However, the blue and aquamarine reads of two samples (A and B) cover the whole genomes when viewing by IGV.

Has anyone encountered this issue earlier?

Best regards.
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Interpreting Color by Pair Orientation

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