Others seeing lower mapping yields using TopHot compared to other aligners?
Systematic evaluation of spliced alignment programs for RNA-seq data: http://www.nature.com/nmeth/journal/...meth.2722.html

- Genohub
Systematic evaluation of spliced alignment programs for RNA-seq data: http://www.nature.com/nmeth/journal/...meth.2722.html

- Genohub