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bakerwm

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Join Date: Sep 2010

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How can soap2sam.pl more fast?

12-19-2013, 04:22 PM

I have some RNASeq fastq files (>6 G/each) and using the first create soap files (>20 G, each). Then I need SAM format files then.

I use the soap2sam.pl by the author of soap, but it goes very very slow.

Code:

$ soap2sam.pl in.soap >in.sam

How can I do this more quick?!
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