Hello, Im a new to bioinformatics.
I have a whole genome of human in BAM file ~80 Gb. It is already aligned to B19.
can I get certain chromosome "in correct order" if I view BAM file via samtools and concatenate nucleotide strings ? or is there any other way ?
The Bam file is only file I have to work with .
I have a whole genome of human in BAM file ~80 Gb. It is already aligned to B19.
can I get certain chromosome "in correct order" if I view BAM file via samtools and concatenate nucleotide strings ? or is there any other way ?
The Bam file is only file I have to work with .
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