Dear all,
I hope I did not miss something and that my question is not too obvious. Regarding the output file junctions.bed, how can we know if a read is mapping several junctions?
My aim is to know what percentage of the total reads are processed by tophat.
Thanks for your help.
I hope I did not miss something and that my question is not too obvious. Regarding the output file junctions.bed, how can we know if a read is mapping several junctions?
My aim is to know what percentage of the total reads are processed by tophat.
Thanks for your help.