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  • vinaydu
    replied
    Please reply members. My blast job is taking very long. Please help..

    Leave a comment:


  • vinaydu
    started a topic Blast Program Memory Usage

    Blast Program Memory Usage

    Dear Members,

    I have compiled and installed blastall and using the same in cent os ver 6.0.

    When I am running this, it consumes very less amount of physical memory and blast is also taking very long.

    free -g command showed that I have 725 Gbs of ram is installed

    ps aux| grep "blastall" gives me the the process id using which I enquired that how much memory blastall is using.

    top psID

    this gives me that blastall is using only 11gb of ram.

    I am using -a option to define the number of processors which is 48.

    What could be reason that blastall is not utilizing the available memory?

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